ISMARA results: SOX{8,9,10}.p2

Motif ID: SOX{8,9,10}.p2

Gene Symbol	Entrez ID	Gene Name
SOX10	6663	SRY (sex determining region Y)-box 10
SOX8	30812	SRY (sex determining region Y)-box 8
SOX9	6662	SRY (sex determining region Y)-box 9

Gene	Promoter	Pearson	P-value	Plot
SOX9	chr17_+_67628772	-0.39	1.4e-01	Click!
SOX10	chr22_-_36709814	0.26	3.2e-01	Click!
SOX8	chr16_+_972064	0.10	7.0e-01	Click!

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Showing 1 to 20 of 200 entries

Promoter	Score	Refseq	Gene Symbol	Gene Name
chr12_+_52665196	1.828	NM_017409	HOXC10	homeobox C10
chr9_+_123501186	1.725		DAB2IP	DAB2 interacting protein
chr7_+_2638156	1.661		TTYH3	tweety homolog 3 (Drosophila)
chr2_+_232281491	1.639		PTMA	prothymosin, alpha
chr20_-_38751289	1.587	NM_005461	MAFB	v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)
chr3_-_11598829	1.583	NM_001128220	VGLL4	vestigial like 4 (Drosophila)
chr12_-_120725210	1.494		LOC338799	hypothetical LOC338799
chr3_-_187309442	1.481	NM_004454	ETV5	ets variant 5
chr2_+_232281470	1.420	NM_001099285 NM_002823	PTMA	prothymosin, alpha
chr1_-_32574185	1.363	NM_023009	MARCKSL1	MARCKS-like 1
chr11_+_20005704	1.355		NAV2	neuron navigator 2
chr9_+_115303527	1.314	NM_130795	RGS3	regulator of G-protein signaling 3
chr1_+_43539239	1.278	NM_005424	TIE1	tyrosine kinase with immunoglobulin-like and EGF-like domains 1
chr7_-_27171673	1.248	NM_152739	HOXA9	homeobox A9
chr17_+_75366524	1.232	NM_005189 NM_032647	CBX2	chromobox homolog 2
chr7_+_2638108	1.213	NM_025250	TTYH3	tweety homolog 3 (Drosophila)
chr1_-_2451543	1.200	NM_001010926	HES5	hairy and enhancer of split 5 (Drosophila)
chr6_+_30796064	1.175		TUBB	tubulin, beta
chr1_+_158636987	1.171	NM_020335	VANGL2	vang-like 2 (van gogh, Drosophila)
chr6_+_43565192	1.149	NM_001146017	TJAP1	tight junction associated protein 1 (peripheral)

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Showing 1 to 20 of 37 entries

enrichment	p-value	GO term	description
2.25	6.53e-05	GO:0030036	actin cytoskeleton organization
2.21	1.46e-05	GO:0030029	actin filament-based process
1.85	2.55e-03	GO:0007264	small GTPase mediated signal transduction
1.65	4.48e-02	GO:0007010	cytoskeleton organization
1.62	3.25e-04	GO:0051128	regulation of cellular component organization
1.55	3.36e-02	GO:0030182	neuron differentiation
1.52	8.66e-03	GO:0048699	generation of neurons
1.50	1.16e-02	GO:0022008	neurogenesis
1.47	7.97e-05	GO:0007399	nervous system development
1.46	7.00e-05	GO:0009653	anatomical structure morphogenesis
1.46	9.89e-03	GO:0022607	cellular component assembly
1.45	2.50e-07	GO:0048869	cellular developmental process
1.45	4.21e-07	GO:0030154	cell differentiation
1.43	1.82e-04	GO:0006996	organelle organization
1.38	5.81e-09	GO:0048856	anatomical structure development
1.38	1.25e-07	GO:0048731	system development
1.35	2.54e-08	GO:0007275	multicellular organismal development
1.35	1.82e-05	GO:0071842	cellular component organization at cellular level
1.34	2.07e-09	GO:0032502	developmental process
1.33	1.05e-03	GO:0051252	regulation of RNA metabolic process

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Showing 1 to 5 of 5 entries

enrichment	p-value	GO term	description
1.94	2.65e-02	GO:0005911	cell-cell junction
1.21	2.22e-06	GO:0005634	nucleus
1.09	1.61e-04	GO:0044424	intracellular part
1.08	3.77e-04	GO:0005622	intracellular
1.08	4.80e-02	GO:0043226	organelle

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Showing 1 to 11 of 11 entries

enrichment	p-value	GO term	description
2.26	3.93e-02	GO:0030674	protein binding, bridging
2.20	4.72e-02	GO:0060090	binding, bridging
1.77	1.72e-02	GO:0003779	actin binding
1.76	6.47e-05	GO:0008092	cytoskeletal protein binding
1.61	1.70e-06	GO:0001071	nucleic acid binding transcription factor activity
1.61	1.70e-06	GO:0003700	sequence-specific DNA binding transcription factor activity
1.55	2.29e-03	GO:0019899	enzyme binding
1.50	4.70e-04	GO:0030528	transcription regulator activity
1.30	1.07e-03	GO:0003677	DNA binding
1.13	1.37e-03	GO:0005515	protein binding
1.07	1.07e-02	GO:0005488	binding